How to Find Spreadsheet Bottlenecks in Nonprofit Budgets in 7 Steps
When your budget cycle drags on for weeks (or months, in some cases) and department heads dread opening shared files, ...
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Every dollar counts in not-for-profit organizations. Therefore, unlike for-profits, nonprofits must maintain grant records, track donations, and track diverse funding sources. However, budgeting and forecasting using spreadsheets can be complex and time-consuming.
Budgeting software helps you streamline processes, provide accurate financial insights, and make informed decisions. This guide explores the benefits of budgeting tools and rounds up the top 6 solutions that can fit nonprofits of all sizes.
Here are the 6 stand-out nonprofit budgeting software:
Martus Solutions is the top choice for nonprofit, faith-based, and education organizations that need budgeting and forecasting built around mission-driven financial planning. Martus integrates directly with nearly any accounting software including Sage Intacct, QuickBooks, Aplos, and more. You can budget across your organization, model multiple scenarios, budget for personnel, and access up-to-date financial data to improve your planning and operational efficiency.
Ready to experience Excel-free software? Take a product demo now and see how our budgeting software can simplify your forecasting and reporting.

The right nonprofit budget software helps you save time and streamline your budget.
Check out the top advantages:
Want to enjoy these benefits and take your budgeting to the next level? Don’t miss out on our guide to future-proof your non-profit’s budget and create long-term, smart budgets.

When you want to streamline your budgeting for your nonprofit, you should prioritize software with the following essential features:

Choosing the best nonprofit budgeting software should depend on your organization's needs and budget.
Take the time to explore the 6 options we’ve discussed below and find the perfect fit to elevate your financial performance.
| Budgeting Software | Best For | Ratings and Reviews | |
| 1 | Martus Solutions | Nonprofit, faith-based, and education organizations — including Aplos users — that need mission-driven budgeting, multi-scenario forecasting, and reporting beyond fund accounting alone. |
G2: 5/5 Capterra: 4.6/5 |
| 2 | Aplos | Nonprofits and faith-based organizations that desire accounting tools specifically tailored to their needs. |
G2 4.7/5 TrustRadius: 8.7/10 |
| 3 | Freshbooks | Small organizations that need customized invoicing and facilitating online payments. |
G2: 4.5/5 TrustRadius: 8/10 |
| 4 | Limelight | Organizations are looking for an intuitive and cloud-based software. |
G2: 4.7/5 TrustRadius:4.5/5 |
| 5 | Workday Adaptive Planning | Nonprofits that are already using the Workday tools and want a tool that can integrate easily within the ecosystem. |
Gartner: 4.8/5 G2: 4.3/5 |
| 6 | Vena | Organizations looking for budgeting software specifically built around Microsoft Excel. |
G2: 4.5 /5 TrustRadius: 4.5 /5 |
Let’s dive deeper into the details of these 6 budgeting software:

Martus is an all-in-one, cloud-based solution to allow you to access data from anywhere and includes all the budgeting tools you need to manage your nonprofit bookkeeping.
Key Features
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Take a tour see how Martus Solutions might be the right choice for your organization.

Aplos is another cloud-based software designed to manage finances for nonprofit or faith-based organizations.
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FreshBooks is especially designed for invoicing, tracking expenses, and receiving online donations.
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Limelight is a budgeting solution designed with integrations and automation to help nonprofits budget faster without using spreadsheets.
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Like Vena, Workday Adaptive Planning combines an Excel-like interface with a cloud-based model to help you with your organization's financial planning.
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Vena is designed for teams who wish to stay within the Excel and Microsoft ecosystem.
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Although we’ve rounded up the best budgeting software for nonprofits, you might still feel overwhelmed when choosing the right software.
You can pick the best fit by following these 4 steps.
Gather insights from stakeholders using the software to identify specific features that best suit your organization's needs. Also, get a list of nice additions.
Some features could be software that can handle large volumes of transactions and offer custom reports. You might also want a tool that integrates with your programs, like volunteer scheduling tools and donor management tools.
With a list of the features you’re looking for in a budgeting software, it’s time to research the available options in the market.
Check budget solutions that similar nonprofit organizations are using. Look for the reputation of the budgeting providers online and check the customer reviews to ensure the tool is reliable and offers customer satisfaction.
Once you’ve shortlisted your budgeting solutions, choose the ones that offer demos to get first-hand experience with your budgeting scenarios.
Pay attention to the product's ease of use, integration capabilities, and functionalities. Also, gather insights into how its features meet your organization's needs.
After you try a few software demos, you should compare the pricing of the chosen nonprofit financial management software with available options in the market.
Remember other recurring costs of adopting the new tool, such as training and support costs, maintenance, and upgrades.
It's essential to consider the total cost of owning your budgeting tool - ensure that any software you choose also offers robust support and ongoing product updates.

After selecting your budgeting solution, the next step is to develop practical steps for using it effectively.
Let’s look at the top 4 essential tips:

Find quick answers to the common questions we get about the best budgeting software for nonprofits.
1. Aplos already has its own budgeting features. Why integrate Martus and Aplos? Martus is one of the few budgeting and forecasting platforms that integrates directly with Aplos. Organizations using Aplos for fund accounting can add Martus for multi-scenario budgeting, advanced forecasting, and reporting without replacing their accounting system – allowing nonprofit teams to expand their budgeting and planning process intuitively.
2. What Are the Typical Costs of Nonprofit Budgeting Software? Costs vary widely depending on organization size, features, and provider — and many providers, including Martus, offer discounted pricing specifically for nonprofit, faith-based, and education organizations. Rather than assuming standard enterprise pricing applies, it's worth asking providers directly about nonprofit-based discounts.
3. How Do You Ensure Data Security with Budgeting Software? Ensure your budgeting software has enterprise-level security compliance, such as SOC 2 Type II, end to end encryption, and regular security audits and testing. See Martus' security and compliance information here.
The right budgeting solution will set your nonprofit up for financial success, draw you closer to your mission, and allow you to worry less about managing numbers.
Pick a software that fits your organization's needs, provides accurate forecasts, and helps shape your financial future.
Martus was originally designed for churches and nonprofits, making it the ideal budgeting and planning software for centralizing data, gathering real-time reports, streamlining budget processes, and collaborating seamlessly across your organization.
Book a demo today to see how to save time with Martus.
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