Nonprofit Expense Categories: Guide + Examples
As a nonprofit leader, you've likely seen organizations struggling with delayed grants, flagged audits, or loss of funders because of unclear expense...
11 min read
Martus Solutions : June 30, 2025
Not-for-profit financial management is notoriously difficult, thanks to limited resources, unpredictable sources of funds, unclear forecasts, fund restrictions, complex compliance requirements, and the ever-glaring need to align with the mission despite challenges.
As nonprofit leaders, you must devise smart and practical financial management strategies to overcome these and many other challenges.
In today's practical guide, we'll discuss how you can use modern financial management software for nonprofit organizations to simplify various processes.
For example, as financial management software designed specifically for nonprofits, Martus can help with solutions such as fund-based accounting, monthly reforecasting, collaborative budgeting, and transparent reporting.
Schedule a consultation with our team to see how Martus can empower your team through actionable financial management practices.
Sound not-for-profit financial management requires you to source, plan, monitor, and report finances in a way that supports your organization’s mission, ensures compliance, and maintains stakeholders’ trust.
Unlike a for-profit company, a nonprofit must balance its budget to fulfill its goals and make a sustainable impact rather than generate a profit.
Here's the basic framework for how financial management works in a nonprofit and how it differs from a for-profit institution:
A not-for-profit makes all its financial decisions based on its mission and goals. You must allocate resources to programs and services that directly support the mission, making it easy to measure success by impact rather than income, like in a for-profit.
The mission-first budgeting process involves forecasting expected income and allocating expenses to categories such as program services, administrative costs, and fundraising.
Many nonprofits deal with restricted donations as donors specify how they want the money to be used. For example, a donor may require you to specifically allocate their money to a scholarship program.
Besides categorizing such funds as restricted donations, you can also have other categories, like unrestricted donations. Restricted donations are further split into temporarily restricted funds and permanently restricted funds.
You can account for every fund separately through fund accounting, which tracks how you allocate and spend restricted or unrestricted monetary resources.
You can use unrestricted funds at your own discretion, usually to cover operating expenses like salaries and rent. Temporarily restricted funds typically apply to time-limited programs or specific grant cycles.
You must strictly stick to donor intent, unlike a for-profit organization, which generally uses its revenue however it decides.
Many nonprofit organizations rely on grants from corporations, foundations, and governments. Grants usually come in annual or multi-year cycles and require formal application, grant reporting, and renewal procedures.
You must track how you spend the grant income within its specified time and terms using separate grant accounts.
For example, if you receive a two-year grant to operate a scholarship program for short courses, you must track it separately. Any unused funds should go back to the grantor. You can also retain and reallocate them with the grantor's permission.
Here's why planning and managing your nonprofit's finances better matters:
Depending on the size and maturity of your nonprofit organization, you can expect financial roles and responsibilities such as:
It's important that all departments collaborate to secure the organization’s financial health.
For example, the program lead should communicate program-related financial information to program participants and the financial department.
Where nonprofit roles are blurred or unclear, especially in small organizations, you may struggle with reduced efficiency, increased team conflict and stress, and decreased ability to achieve your mission.
Effective financial management requires structure, adaptability, and alignment with the mission.
Here are practical steps to help you manage resources strategically and transparently while staying ready for changes.
You need to develop comprehensive budgets for programs and the overall organization, indicating your expected revenues and expenses.
Use fund and expense tracking tools to identify areas for cost savings and increasing revenue.
Your budgets should be forecast-ready, meaning they are designed for regular updating and revision based on actual performance and changing situations.
The idea is to eliminate the issues of traditional static budgets, so you can make informed decisions and adjust your finances as needed.
Let's check out some important actions at this stage:
You should assign clear user roles and responsibilities so that every staff member and leader aligns with your mission and objectives.
You can assign the roles we discussed earlier, such as the program lead, CFO, and finance director.
Segregating duties is important as an internal control measure to ensure that no individual can single-handedly complete a financial transaction.
For instance, a program manager can manage their own program budget, but the financial team and the board review it before the funds are disbursed.
Consider the actions below at this stage:
Ensure your not-for-profit financial reporting shows not only the money you've spent but also the missions and impacts you've accomplished.
You'll want to consider actions like the ones below:
As part of your nonprofit accounting, use the fund accounting feature in your accounting tool to track restricted and unrestricted funds separately.
Consider these actions:
Check how cash flows in and out of the organization to ensure you are ahead of pitfalls such as delayed grant payments.
Here's what to do at this stage:
Have regular financial reviews and analyses with the leaders and the board to keep everyone accountable and aligned.
You can meet monthly with leadership and quarterly with the board's finance committee, depending on how your organization operates.
You can do the following in this step:
You'll want to be grant- and audit-ready all the time, rather than during deadlines only.
You can do the following:
Use nonprofit budgeting and financial management software to streamline how you manage your nonprofit finances.
With dedicated not-for-profit financial software like Martus, you can simplify the process through our automation and modern budgeting, forecasting, and reporting tools.
Here are some activities to complete for this step:
Communicate your financial health with donors, grantors, the public, and other stakeholders to gain their trust and support.
You can:
These steps can help you build a financially sound, transparent, accountable, and impact-driven organization that funders trust.
Let's build up further on improving reporting transparency in this section.
You'll want to improve critical aspects like functional expense reporting and grant-specific reporting. You must do this despite pain points such as manual data importation, lack of dashboard visibility, and the complexity of compliance requirements.
For grant reporting, you need to show grantors how you used their grant. Make time-bound reports (quarterly, semiannually, or annually) to prove that you used funds as per the restrictions.
Your Statement of Functional Expenses should be consistent and accurate, with expenses properly classified based on their nature and function.
To improve financial reporting and transparency, you can:
Your financial management journey won't be all about upsides. You can encounter common pitfalls such as:
You are likely to struggle with limited coordination and communication between program staff and the financial team.
The disconnect can cause confusion and stress, leading to missed opportunities, inefficient allocation of resources, and financial decisions that lack full program context.
Lack of coordination and transparency can erode your credibility with donors and make it harder to secure future funding.
To deal with this, you can promote open communication and collaboration and provide financial literacy training to program staff.
If you can't reforecast efficiently and effectively, you'll struggle to adapt to changing situations, such as unexpected financial shortfalls.
You'll need specialized expertise and software with forecasting functionalities to help you reforecast regularly, especially monthly, to capture budget vs. actuals realities.
Complexities in compliance requirements, restricted funds, and fund accounting can make it difficult to generate accurate and transparent financial statements for your not-for-profit organization.
If your not-for-profit financials are inaccurate or late, your credibility with the board can erode. You also reduce the board's ability to make informed decisions.
You can ensure clean reporting by using a robust accounting system, offering staff financial literacy training, segregating duties, embracing collaboration, and working with professional accountants.
The good news is that you can overcome these and other hurdles with the right not-for-profit financial software, including accounting tools and budgeting, forecasting, and reporting software.
The features and capabilities of these tools can streamline your financial management. For example:
Martus fits the bill as a dedicated tool for not-for-profit financial management.
Built with nonprofits in mind, Martus integrates with your accounting software for automatic data pulls. It also supports nonprofit collaborative budgeting, timely reporting, and data-informed forecasting.
You can use Martus for its end-user lock controls, real-time dashboards, and the ability to cut the time you spend managing finances by 50% compared to traditional tools like spreadsheets.
Schedule a demo today to see Martus in action.
Have additional questions about not-for-profit financial management? We've got the answers.
The key financial statements for not-for-profit organizations are:
Your accounting software can help you collect all the data you need to generate accurate financial statements.
Not-for-profits must follow Generally Accepted Accounting Principles (GAAP), a set of accounting standards, practices, and rules established by the FASB to guide organizations in preparing and presenting financial statements.
It's also wise to follow the recommendations of the American Institute of Certified Public Accountants (AICPA).
While it doesn't issue accounting standards that directly apply to not-for-profits, the AICPA supports them by offering audit and accounting guides, best practice publications, and training resources.
For example, you can refer to the AICPA’s Not-For-Profit Entities Audit and Accounting Guide to learn more about nonprofit auditing and how to prepare your financial statements.
Your accounting software tool can follow various accounting standards, such as accrual accounting, to streamline compliance.
You can track restricted and unrestricted funds using accounting software that supports fund accounting, the specialized type of accounting for monitoring different types of funds and restrictions.
You can track Net Assets Without Donor Restrictions and Net Assets With Donor Restrictions, which can be restricted temporarily or permanently.
You'll find the ability to track revenues and expenses using dimensional tags in your accounting software helpful in determining the release of donor-imposed restrictions to keep your program leads alerted in time.
By building a successful not-for-profit financial management system, you can have smart actions, processes, and decisions that lead to better mission outcomes.
You can maximize your impact if you focus on informed budgeting, accounting, forecasting, and reporting with the input of both financial and non-financial teams.
To achieve this, you need to use nonprofit-specific financial software to simplify the process.
For example, Martus can simplify budgeting, forecasting, and reporting through collaboration, real-time dashboards, analytical tools, and pre-built reports.
Connect with us today to learn more about Martus and how it can help you improve your nonprofit financial management.
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